Par0041

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Image data

  • Extremity MRI
  • Images were obtained by application of super-resolution reconstruction (SRR) to a coronal and axial image pair (coronal image: intravenous injection of gadolinium contrast, T1-weighted Fast Spin-Echo sequence with frequency-selective fat saturation (voxel size: ~ 0.2 x 0.2 x 2.2 mm); axial image: intravenous injection of gadolinium contrast, T1-weighted Fast Spin-Echo sequence with frequency-selective fat saturation (voxel size: ~ 0.2 x 0.2 x 3.3 mm)).
  • Voxel size of SRR image: ~ 0.2 x 0.2 x 0.2 mm

Application

  • The registration was used for atlas-based segmentation of the carpal bones.


Registration settings

elastix version: 4.600

Parameter files:

Description:

  • Aligns the atlas image to the target image

Command line call:

elastix -f TargetImage.mhd -m AtlasImage.mhd -p par0041similarity.txt -p par0041bspline.txt -out outputdir
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